MONO LAKE MICROBIAL OBSERVATORY PUBLICATION LIST

Listed by date

(updated 14-Nov-2007; Download Acrobat PDF)

Peer-Reviewed Publications

1. Hollibaugh, J.T., P.S. Wong, N. Bano, S.K. Pak, E.M. Prager and C. Orrego. 2001. Stratification of microbial assemblages in Mono Lake, California, and response to a mixing event. Hydrobiologia 466: 45-60. MCB 99-77886

2. Lucas, F. and J.T. Hollibaugh. 2001. Shifts in the composition of estuarine sediment bacterial assemblages in response to amendments with selenate and acetate. Environmental Science and Technology 35: 528-534. MCB 99-77886

3. Hoeft, S. E., F. Lucas, J.T. Hollibaugh, and R.S. Oremland. 2002. Characterization of bacterial arsenate reduction in the anoxic bottom waters of Mono Lake, California. Geomicrobiology Journal 19: 23-40. MCB 99-77886

4. Oremland, R.S., S.E. Hoeft, J.M. Santini, N. Bano, R.A. Hollibaugh and J.T. Hollibaugh. 2002. Anaerobic oxidation of arsenite in Mono Lake water and by a facultative chemoautotroph, strain MLHE-1. Applied and Environmental Microbiology 68: 4795-4802. MCB 99-77886

5. Humayoun, S., N. Bano and J.T. Hollibaugh. 2003. Phylogenetic composition of the bacterioplankton from an alkaline, hypersaline lake, Mono Lake, California. Applied and Environmental Microbiology 69:1030-1042. MCB 99-77886 and MCB 99-77901.

6. Carini, S.A., B. N. Orcutt, and Joye, S.B. 2003. Interactions between methane oxidation and nitrification in coastal sediments. Geomicrobiology Journal 20:355-374. MCB 99-77886

7. Steward, G., J.P. Zehr, R. Jellison, J.P. Montoya and J.T. Hollibaugh. 2004. Vertical distribution of nitrogen-fixing phylotypes in a meromictic hypersaline lake. Microbial Ecology 47: 30-40. MCB 99-77892, MCB 99-77886 and MCB 99­77901.

8. Jiang, S., G.F. Steward, R. Jellison, W. Chu, S. Choi. 2003. Abundance, distribution and diversity of viruses in an alkaline hypersaline lake, Mono Lake, California. Microbial Ecology 47: 9-17. MCB 99-77892 and MCB 99-77901.

9. Oremland, R.S., J.F. Stolz and J.T. Hollibaugh. 2004. The microbial arsenic cycle in Mono Lake, California. FEMS Microbiology Ecology 48: 15-27. MCB 99-77886

10. Giri, B.J., N. Bano and J.T. Hollibaugh. 2004. Distribution of RuBisCO genotypes along a redox gradient in Mono Lake, California. Applied and Environmental Microbiology 70:3443-3448. MCB 99-77886

11. Hoeft, S.E., T.R. Kulp, J.F. Stolz, J.T. Hollibaugh and R.S. Oremland. 2004. Dissimilatory arsenate reduction with sulfide as the electron donor: experiments with Mono Lake water and isolation of Strain MLMS-1, a chemoautotrophic arsenate-respirer. Applied and Environmental Microbiology 70: 2741-2747. MCB 99-77886

12. LeCleir, G.R., A. Buchan, and J.T. Hollibaugh. 2004. Chitinase gene sequences from diverse aquatic habitats reveal complex patterns of diversity. Applied and Environmental Microbiology 69: 6977-6983. MCB 99-77886

13. Hollibaugh, J.T., S. Carini, H. Gürleyük, R. Jellison, S.B. Joye, G. Lecleir, C. Meile, L. Vasquez and D. Wallschläger. 2005. Distribution of arsenic species in alkaline, hypersaline, Mono Lake, California and response to seasonal stratification and anoxia. Geochimica et Cosmochimica Acta 69:1925-1937. MCB 99-77886 and MCB 99-77901.

14. Scholten, J.C.M , S.B. Joye, J.T. Hollibaugh and J.C. Murrell. 2005. Molecular analysis of the sulfate reducing and Archaeal community in a meromictic lake (Mono Lake, California) by targeting 16s rRNA, mcrA, apsA and dsrAB reductase genes. Microbial Ecology 50: 29-39. MCB 99-77886

15. Poretsky, R.S., N. Bano, A. Buchan, G. LeCleir, J. Kleikemper, M. Pickering, W.M. Pate, M.A. Moran and J.T. Hollibaugh.. 2005. Analysis of microbial gene transcripts in environmental samples. Applied and Environmental Microbiology 71: 4121-4126. MCB 99-77886

16. Zehr, J.P., M.J. Church and P.H. Moisander. 2005. Diversity, distribution and biogeochemical significance of nitrogen-fixing microorganisms in anoxic and suboxic ocean environments. In: Anoxic Basins. Lev Neretin (Ed.). NATO Conference Series in Marine Sciences 38, pp 237-249. MCB 99-77892

17. Carini, S., N. Bano, G. LeCleir, and S.B. Joye. 2005. Patterns of aerobic methanotrophy and methanotroph community composition during seasonal stratification in a meromictic lake, Mono Lake, CA. Environmental Microbiology 7: 1127-1138. MCB 99-77886.

18. Nercessian, O., M.G. Kalyuzhnaya, S.B. Joye, M.E. Lidstrom, & L. Chistoserdova. 2005. Analysis of fae and fhcD genes in Mono Lake, California. Applied and Environmental Microbiology 71: 8949-8953. MCB 99-77886

19. Lin, J.-L., S.B. Joye, J.C.M. Scholten, H. Schafer, I.R. McDonald and J. Colin Murrell. 2005. Analysis of methane monooxygenase genes in Mono Lake suggests that increased methane oxidation activity may correlate with a change in methanotroph community structure. Applied and Environmental Microbiology 71: 6458-6462. MCB 99-77886

20. LeCleir, G.R. and J.T. Hollibaugh. 2006. Chitinolytic bacteria from alkaline, hypersaline Mono Lake, California. Aquatic Microbial Ecology 42: 255-264. MCB 99-77886.

21. Hollibaugh, J.T., C. Budinoff, R.A. Hollibaugh, B. Ransom and N. Bano. 2006. Sulfide oxidation coupled to arsenate reduction by a diverse microbial community in a soda lake. Applied and Environmental Microbiology 72: 2043-2049. MCB 99-77886

22. LeCleir, G.R., A. Buchan, J. Maurer, M.A. Moran and J.T. Hollibaugh. 2007. Comparison of chitinolytic enzymes from an alkaline, hypersaline lake and an estuary. Environmental Microbiology 9: 197-205. MCB 99-77886.

23. Budinoff, C.R. and J.T. Hollibaugh. 2007. Ecophysiology of a Mono Lake cyanobacterium. Limnology and Oceanography 52: 2484-2496. MCB 99-77886.

24. Poretsky, R.S., N. Bano, A. Buchan, J.T. Hollibaugh and M.A. Moran. 2006. Environmental Transcriptomics: A method to access expressed genes in complex microbial communities. In Molecular Microbial Ecology Manual, 3rd Ed. In press MCB 99-77886

25. Turicha, C.H., K.H. Freeman, M.A, Bruns, M. Contec, A.D. Jones and S.G. Wakeham. Submitted. Marine Archaeal lipid distributions: patterns and provenance in the water column. Geochimica et Cosmochimica Acta. MCB 99­77886 and MCB 99-77901.

26. Fisher, J.C., D. Wallschläger, B. Planer-Friedrich and J.T. Hollibaugh. In press. Sulfur plays an unexpected role in the arsenic cycle of Mono Lake, CA. Environmental Science and Technology. MCB 99-77886

27. Jørgensen, N.O.G., P. Engel, R. Jellison and J.T. Hollibaugh. In revision. Contribution of bacterial cell wall components to DOM in alkaline, hypersaline Mono Lake, California. Geomicrobiology Journal. MCB 99-77886 and MCB 99­77901

28. Fisher, J.C. and J.T. Hollibaugh. Submitted. Selenate-dependent anaerobic arsenite oxidation by a bacterium from Mono Lake, CA. Applied and Environmental Microbiology. MCB 99-77886

29. Budinoff, C.R. and J.T. Hollibaugh. Submitted. Arsenite-dependent photoautotrophy by an Ectothiorhodospira-dominated consortium. ISME Journal. MCB 99-77886

30. Fisher, J.C. and James T. Hollibaugh. Submitted. Bacillus oremlandii, sp. nov., a selenate-reducing, arsenite-oxidizing bacterium isolated from a hypersaline soda lake (Mono Lake, CA). International Journal of Systematic and Evolutionary Microbiology. MCB 99-77886

Published Abstracts and Seminars

1. Joye, S.B. Archean analogs: Methane biogeochemistry in an alkaline soda lake: Mono lake, California. Carnegie Institution of Washington Geophysical Laboratory, Washington DC, Sept 2000. MCB 99-77886.

2. Jiang, S., G. Steward, R. Jellison, S.B. Joye and J.T. Hollibaugh. Abundance and diversity of viruses in an alkaline hypersaline lake - Mono Lake, California. American Society of Limnology and Oceanography Annual Meeting, Albequerque NM, February 2001. MCB 99-77886, MCB 99-77892 and MCB 99-77901.

3. Steward, G.F., Jellison, R.S., Hollibaugh, J.T., Joye, S.B., and Zehr, J.P. Detection of novel and diverse nitrogenase genes suggests potential for pelagic diazotrophy in alkaline, hypersaline Mono Lake. American Society for Limnology and Oceanography Annual Meeting, Albuquerque NM, February 2001. MCB 99­77886 MCB, 99-77892 and MCB 99-77901.

4. Joye, S.B., S. A. Carini, and B. Orcutt. Methane oxidation and the distribution of methanotrophs in the environment. American Society for Microbiology Annual Meeting, Atlanta GA, May 2001. MCB 99-77886.

5. Joye, S.B. Biogeochemistry of methane in alkaline, hypersaline Mono Lake. Seminar presented to the University of Georgia, Department of Microbiology, Athens GA, June 2001. MCB 99-77886.

6. Hoeft, S. E., F. Lucas, J.T. Hollibaugh, and R.S. Oremland. Characterization of bacterial arsenate reduction in the anoxic bottom waters of a meromictic, hypersaline, alkaline soda lake: Mono Lake, California. International Symposium on Environmental Biogeochemistry, Warsaw, Poland, August 2001. MCB 99­77886.

7. Joye, S.B., S. A. Carini, R. Jellison and J. T. Hollibaugh. Molecular ecology and biogeochemistry of methane cycling in an alkaline, hypersaline lake. International Symposium on Microbial Ecology, Amsterdam, the Netherlands, August 2001. MCB 99-77886.

8. Joye, S.B. Molecular biogeochemistry: Linking the distribution of microbes to their biogeochemical function in the environment. International Symposium on Environmental Biogeochemistry, Warsaw, Poland, August 2001. MCB 99-77886.

9. Humayoun, S., G. Lecleir, N. Bano, J.T. Hollibaugh. Composition of bacterial assemblages from alkaline, hypersaline Mono Lake, California. International Symposium on Microbial Ecology, Amsterdam, the Netherlands, September 2001. MCB 99-77886.

10. Lucas, F.S., J. Switzer-Blum, R.S. Oremland, and J.T. Hollibaugh. Identification of mRNA differentially transcribed by Sulfurospirillum barnesii SES-3 during selenate versus nitrate respiration. International Symposium on Microbial Ecology, Amsterdam, the Netherlands, September 2001. MCB 99-77886.

11. Hollibaugh, J.T., G. Rocap, N. Ahlgren, S.W. Chisholm, J. Nelson and R.S. Jellison. An unusual Synechococcus from Mono Lake, California. American Society of Limnology and Oceanography Annual Meeting, Victoria, B.C., Canada, June 2002. MCB 99-77886.

12. Roll, S.K. and R. Jellison. Seasonal variability in the deep chlorophyll maximum in hypersaline Mono Lake, California and the contribution of newly described Picosystis Salinarum. American Society of Limnology and Oceanography Annual Meeting,Victoria, B.C., Canada, June 2002. DEB95-08733, MCB99-77901. (Abstract)

13. Stephens, A.Q., G.F. Steward and J.P. Zehr. Computer simulation of TRFLP using functional gene sequences and implications for microbial community analysis. American Society for Limnology and Oceanography Summer Meeting. Victoria, B.C. Canada, June 2002. MCB 99-77892

14. Budinoff, C. and J.T. Hollibaugh. Ecology and physiology of a phylogenetically unique Synechococcus from Mono Lake. ASLO Aquatic Sciences Meeting. Salt Lake City, Utah, February 2003. MCB 99-77886.

15. Carini, S.A. and S.B. Joye. Patterns of aerobic methane oxidation and methanotroph community composition during development of thermal stratification in Mono Lake, California. ASLO Aquatic Sciences Meeting. Salt Lake City, Utah, February 2003. MCB 99-77886.

16. Giri, B.J., N. Bano and J.T. Hollibaugh. Phylogenetic diversity of RuBisCO gene along a redox gradient in Mono Lake, USA. ASLO Aquatic Sciences Meeting. Salt Lake City, Utah, February 2003. MCB 99-77886.

17. Hollibaugh, J.T., S. Humayoun, N. Bano and R.E. Jellison. Diversity of bacteria in alkaline, hypersaline Mono Lake, California, during a period of meromixis. ASLO Aquatic Sciences Meeting. Salt Lake City, Utah, February 2003. MCB 99-77901 and MCB 99-77886.

18. Joye, S.B., S.A. Carini, V. Samarkin, J. T. Hollibaugh, and R.S. Jellison. Spatial and seasonal patterns of the anaerobic oxidation of methane in Mono Lake, California.. ASLO Aquatic Sciences Meeting. Salt Lake City, Utah, February 2003. MCB 99-77901 and MCB 99-77886.

19. Roll, S.K. and R. Jellison. The non-linear response of early instar Artemia development to food availability results in large variations in peak adult abundances in hypersaline Mono Lake, California. ASLO Aquatic Sciences Meeting. Salt Lake City, Utah, February 2003. DEB95-08733, MCB99-77901.  (Abstract)

20. Scholten, J.C.M, S.B. Joye, J.T. Hollibaugh, A.J.M. Stams and J.C. Murrell. Anaerobic degradation of glycine-betaine in Mono Lake, a moderately, hypersaline, alkaline environment. ASLO Aquatic Sciences Meeting. Salt Lake City, Utah, February 2003. MCB 99-77886.

21. Steward, G. F., Zehr, J. P., Jenkins, B. D., Montoya, J. P., Jellison, R. S. and Hollibaugh, J. T. 2003. Diverse nitrogen-fixers, but undetectable nitrogen fixation in alkaline, hypersaline, meromictic Mono Lake, California. ASLO Aquatic Sciences Meeting. Salt Lake City, Utah, February 2003. MCB 99-77892, MCB 99-77901 and MCB 99-77886

22. Carini, S. and S.B. Joye. Seasonal variations in aerobic methane oxidation rates in Mono Lake (USA) as a function of geochemical variables and methanotroph community composition. AGU/EUG/EGU meeting Nice, France, April 2003. MCB 99-77886

23. Joye, S.B., S. Carini, V. Samarkin, R. Jellison and J.T Hollibaugh. Seasonal decoupling of sulfate reduction and anaerobic oxidation of methane in Mono Lake, California. AGU/EUG/EGU meeting Nice, France, April 2003. MCB 99­77886 and MCB 99-77901.

24. Wallschläger, D., H. Gürleyük and J.T. Hollibaugh. Arsenic speciation and cycling in a permanently-stratified soda lake. 39th IUPAC Congress. Ottawa, Ontario Canada, August 2003

25. Budinoff, C. and J.T. Hollibaugh. Ecology and physiology of a Mono Lake cyanobacterium. 11th International Symposium on Phototrophic Prokaryotes. Tokyo, Japan August 24th-29th, 2003. MCB 99-77886.

26. LeCleir, G.R., A. Buchan, and J.T. Hollibaugh. Comparison of group I chitinase gene sequences from diverse environments: implications of environmental effects on extracellular enzymes. American Society of Limnology and Oceanography Annual Meeting, Savannah Georgia, June 12, 2004. MCB 99-77886.

27. Ransom, B., N. Bano, C. Budinoff, R.A. Hollibaugh and J.T. Hollibaugh. Sulfide oxidation drives dissimilatory arsenate reduction in alkaline, hypersaline, Mono Lake, California. American Society of Limnology and Oceanography Annual Meeting, Savannah Georgia, June 12, 2004. MCB 99-77886.

28. Smith A., N. Bano, M. Washington, and J.T. Hollibaugh. Vertical distribution of bacteria in sediment from Mono Lake, California. American Society of Limnology and Oceanography Annual Meeting, Savannah Georgia, June 12, 2004. MCB 99-77886.

29. Davidson, L.A. and A.E. Davidson. The range of protists in Mono Lake, a hypersaline soda lake in the eastern Sierras. 36th Annual Midwest Protozoology Meeting. Univ. Chicago, IL, 24 April 2004. MCB 99-77901

30. Fisher, Jen and J.T. Hollibaugh. Role of sulfide, selenate and nitrate in arsenite oxidation in Mono Lake, CA. American Geophysical Union Annual Meeting. San Francisco, CA, 13-17 December 2004. MCB 99-77886 (Download Poster) «Outstanding Poster Winner»

31. Hollibaugh J.T., S. Carini, H. Gürleyük, R. Jellison, S.B. Joye, G. LeCleir, C. Meile, L. Vasquez and and D. Wallschläger. Thio-arsenic species in alkaline, hypersaline, meromictic Mono Lake, California. American Geophysical Union Annual Meeting. San Francisco, CA, 13-17 December 2004. MCB 99-77886

32. Analysis of microbial communities in a soda lake: Who is doing what with whom, and how do we know? Invited seminar, University of Tennessee, Department of Microbiology, Knoxville TN, 10 October, 2005. MCB 99-77886

33. Hollibaugh, J.T., C. Budinoff, R.A. Hollibaugh, B. Ransom and N. Bano. Sulfide oxidation coupled to arsenate- or nitrate-reduction by a diverse microbial community in a soda lake. Georgia Tech Microbial Ecology Symposium, Atlanta, GA. 30-31 March, 2006. MCB 99-77886

34. Hollibaugh, J.T., C. Budinoff, R.A. Hollibaugh, B. Ransom and N. Bano. Sulfide oxidation coupled to arsenate- or nitrate-reduction by a diverse microbial community in an arsenic-enriched soda lake. 11th International Symposium on Microbial Ecology, Vienna, Austria. 17-22 August, 2006. MCB 99-77886.

35. Budinoff, C.R. and J.T. Hollibaugh. Arsenite-dependent anoxygenic photosynthesis by bacteria from Mono Lake, California. AGU annual meeting, San Francisco, CA, 10-14 December, 2007. MCB 99-77886

36. Microbially-mediated arsenic geochemistry in an alkaline, hypersaline and meromictic lake. Invited seminar, Department of Microbiology, University of Georgia. 29 March, 2007. MCB 99-77886

37. Arsenic and Old Lakes. Seminar, Department of Marine Sciences, University of Georgia. 18 April 2007. MCB 99-77886